Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003364.1 Hibiscus syriacus cultivar Beakdansim tig00007076_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82568

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20164--20240
27
2.9
27
80
9
86
29
12
7
49
1.69
30098--30187
29
3.1
29
98
0
171
42
5
24
27
1.77
31307--31353
18
2.6
17
87
9
67
6
40
12
40
1.69
34121--34145
10
2.5
10
100
0
50
0
8
0
92
0.40
34707--35289
298
2.0
299
97
0
1105
34
10
18
37
1.85
48359--48402
21
2.1
21
86
0
61
47
6
6
38
1.57
48517--48559
14
3.0
14
82
3
59
58
0
0
41
0.98
59751--59785
2
17.5
2
100
0
70
51
0
0
48
1.00
60887--60916
12
2.5
12
94
0
51
10
10
16
63
1.51
62911--62955
16
2.8
16
93
0
72
40
17
4
37
1.70
62917--62967
16
3.2
16
88
2
59
37
21
3
37
1.72
77272--77358
35
2.5
34
77
18
90
55
9
8
27
1.60
77573--77624
27
1.9
27
84
0
68
13
32
19
34
1.90
79443--79766
109
3.0
108
91
4
555
45
10
7
36
1.68
79892--79929
10
3.8
10
83
13
51
42
0
26
31
1.56
80357--80383
2
13.5
2
100
0
54
48
0
0
51
1.00
81042--81076
4
8.8
4
93
0
61
25
20
25
28
1.99
81046--81088
12
3.6
12
87
0
59
27
16
23
32
1.96

Tables:   1

The End!