Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003368.1 Hibiscus syriacus cultivar Beakdansim tig00007080_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76430

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27934--27972
21
1.9
21
94
5
71
15
25
25
33
1.95
27935--28025
10
9.4
9
72
13
74
16
26
27
29
1.97
27934--28025
19
4.7
20
80
14
93
17
26
27
29
1.97
27934--28008
29
2.5
30
89
8
118
17
26
26
29
1.97
28021--28075
22
2.5
22
96
0
101
18
45
23
12
1.83
28064--28088
7
3.6
7
100
0
50
16
28
28
28
1.97
28958--29034
31
2.5
31
82
2
100
14
25
31
28
1.95
28958--29081
63
2.0
63
82
6
153
16
27
29
26
1.97
34169--34208
21
1.9
21
94
0
71
47
0
12
40
1.41
45156--45194
21
1.9
21
94
5
71
15
25
25
33
1.95
45157--45247
10
9.4
9
72
13
74
16
26
27
29
1.97
45156--45247
19
4.7
20
80
14
93
17
26
27
29
1.97
45156--45230
29
2.5
30
89
8
118
17
26
26
29
1.97
45243--45297
22
2.5
22
96
0
101
18
45
23
12
1.83
45286--45310
7
3.6
7
100
0
50
16
28
28
28
1.97
46180--46256
31
2.5
31
82
2
100
14
25
31
28
1.95
46180--46303
63
2.0
63
82
6
153
16
27
29
26
1.97
51385--51424
21
1.9
21
94
0
71
47
0
12
40
1.41
62133--62241
56
1.9
56
85
3
148
34
8
2
54
1.45

Tables:   1

The End!