Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003373.1 Hibiscus syriacus cultivar Beakdansim tig00007087_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  98699

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
922--1013
35
2.7
35
83
5
98
35
8
9
45
1.68
930--1013
17
4.8
17
82
4
87
33
9
10
46
1.71
6173--6204
2
16.5
2
93
6
57
0
50
0
50
1.00
6173--6201
15
1.9
15
100
0
58
0
51
0
48
1.00
8972--9027
24
2.4
23
84
3
67
44
0
10
44
1.38
13020--13152
66
2.0
66
95
0
239
39
33
8
18
1.81
25741--25807
24
2.6
27
76
13
86
37
2
10
49
1.53
35624--35745
61
2.0
60
91
1
199
41
15
11
31
1.83
36058--36179
61
2.0
60
93
1
208
40
15
12
31
1.84
36491--36612
61
2.0
60
93
1
208
40
15
12
31
1.84
35521--37246
434
4.0
434
99
0
3382
35
14
13
36
1.86
36925--37046
61
2.0
60
91
1
199
41
16
12
29
1.85
35523--37246
867
2.0
867
99
0
3385
35
14
13
36
1.86
37989--38021
17
1.9
17
88
11
50
36
0
3
60
1.12
40512--40536
12
2.1
12
100
0
50
16
8
12
64
1.49
40586--40707
41
3.0
41
96
0
226
36
18
13
31
1.90
41270--41407
59
2.3
59
90
2
206
37
10
13
39
1.78
51476--51524
16
3.2
16
70
18
50
59
0
0
40
0.98
51479--51537
21
2.8
21
84
5
75
57
0
0
42
0.98
51498--51556
21
2.8
20
82
12
66
52
1
1
44
1.21
51481--51623
11
13.9
10
66
15
69
48
3
2
45
1.34
51500--51568
21
3.3
21
78
8
61
52
1
2
43
1.25
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57533--57738
43
4.9
41
74
11
175
50
4
17
27
1.65
57479--57665
84
2.2
84
82
10
213
50
3
20
25
1.65
60394--60422
2
14.5
2
100
0
58
51
0
0
48
1.00
61012--61061
17
2.9
17
80
11
66
38
20
12
30
1.88
62518--62628
32
3.5
32
77
9
93
18
12
28
40
1.87
63216--63271
18
3.1
18
72
12
53
42
0
0
57
0.99
63418--63457
21
1.9
21
94
0
71
12
5
25
57
1.55
67023--67082
21
3.2
20
65
30
51
33
5
18
43
1.72
67022--67136
35
3.2
35
84
4
142
33
6
18
41
1.75
71216--71246
15
2.1
15
93
0
53
32
12
38
16
1.86
71639--71755
35
3.3
37
83
7
134
35
0
17
45
1.55
73500--73529
2
15.0
2
100
0
60
50
0
0
50
1.00
75982--76324
169
2.0
169
100
0
686
39
18
12
28
1.88
78692--78749
18
3.3
18
72
22
61
51
0
0
48
1.00
79560--79605
22
2.0
23
87
4
67
39
13
19
28
1.89
80324--80365
22
2.0
21
90
4
66
54
9
0
35
1.33
92611--92640
13
2.4
13
94
5
53
56
0
6
36
1.26

Tables:   1

The End!