Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003374.1 Hibiscus syriacus cultivar Beakdansim tig00007091_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66021

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2231--2584
185
1.9
182
82
9
439
42
16
14
26
1.86
4066--4100
9
3.8
9
88
7
52
82
0
14
2
0.77
4066--4104
19
2.0
20
90
5
62
82
0
15
2
0.79
7392--7463
36
2.0
36
100
0
144
22
11
27
38
1.88
17145--17174
2
15.0
2
100
0
60
50
0
0
50
1.00
17636--17665
5
6.0
5
100
0
60
0
80
0
20
0.72
17725--17775
26
2.0
26
92
0
84
21
19
15
43
1.88
20956--21032
32
2.4
32
82
2
91
23
9
15
51
1.71
22068--22391
122
2.7
121
81
1
382
41
16
15
27
1.88
22646--23076
122
3.5
123
80
5
412
38
16
16
28
1.90
26266--26292
2
13.5
2
100
0
54
48
0
0
51
1.00
28148--28184
18
2.1
18
89
0
56
29
0
2
67
1.04
30233--30264
2
16.0
2
100
0
64
50
0
0
50
1.00
30713--30787
28
2.7
28
77
6
73
49
4
14
32
1.62
32763--32869
52
2.1
52
90
0
169
38
33
9
18
1.83
38283--38319
19
2.0
20
89
10
60
67
5
27
0
1.12
46012--46087
21
3.6
21
74
13
84
17
21
27
34
1.95
46018--46112
42
2.3
42
94
0
163
18
18
25
36
1.94
46713--46748
16
2.2
16
95
0
63
0
22
41
36
1.54
46848--47051
21
9.8
21
66
20
99
36
24
18
21
1.95
46831--47100
42
6.6
41
93
3
447
35
24
19
20
1.95
46831--47100
82
3.3
82
95
2
463
35
24
19
20
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47115--47165
21
2.4
21
93
0
84
19
23
27
29
1.98
47360--47402
21
2.2
20
87
8
61
39
2
0
58
1.11
61386--61419
16
2.1
16
88
5
50
73
2
8
14
1.19
65350--65390
20
2.0
20
95
0
73
43
29
0
26
1.55

Tables:   1

The End!