Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003380.1 Hibiscus syriacus cultivar Beakdansim tig00007109_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40142

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15043--15232
94
2.0
94
96
0
353
53
13
10
23
1.69
18658--18712
28
1.9
30
85
10
80
14
7
16
61
1.54
25479--25519
21
2.0
20
85
9
55
63
4
9
21
1.44
25654--25709
21
2.8
20
81
5
67
30
19
14
35
1.91
25762--25913
20
7.6
20
68
10
69
30
23
11
33
1.91
25845--25932
40
2.2
40
81
0
104
32
23
10
32
1.89
25904--25955
18
2.7
20
73
11
63
34
21
7
36
1.82
26866--26919
24
2.2
24
90
0
81
22
18
18
40
1.91
27691--27828
40
3.4
40
73
21
117
28
2
1
67
1.11
27741--27821
39
2.2
36
79
12
94
28
2
0
69
1.02
27773--27882
9
11.0
9
69
21
51
18
4
0
76
1.01
27741--27832
40
2.3
39
88
5
130
27
2
0
70
0.98
27758--27823
34
2.0
35
85
14
95
25
3
0
71
1.01
27789--27865
24
3.2
24
77
15
70
19
5
1
74
1.08
27762--27845
32
2.7
30
79
15
91
22
2
1
73
1.01
27727--27900
83
2.0
85
79
11
187
22
5
1
70
1.15
27970--28000
16
2.0
16
93
6
55
19
19
0
61
1.35
30478--30516
8
5.0
8
84
6
53
10
17
12
58
1.61
31703--31752
9
5.3
9
78
7
55
86
6
8
0
0.72
31703--31769
23
3.0
23
81
14
77
80
5
13
0
0.88
32379--32433
22
2.5
22
96
0
101
38
25
12
23
1.90
32830--32865
18
2.0
18
88
0
54
19
8
30
41
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33287--33549
36
7.4
36
78
10
265
27
19
13
39
1.89
33231--33612
138
2.8
137
84
3
505
29
19
12
38
1.89
33507--33681
65
2.6
65
84
4
224
33
21
9
36
1.85
34285--34734
105
4.3
105
92
2
685
32
26
18
22
1.97
35794--35843
21
2.4
20
78
15
57
22
6
4
68
1.29
35859--35982
38
3.0
41
77
14
123
29
2
0
66
1.09
35912--35990
28
2.8
28
75
17
74
20
2
1
75
0.98
35908--35969
31
2.0
31
84
15
83
24
3
0
72
0.99
35925--35982
20
2.7
21
76
10
64
22
1
0
75
0.89
36113--36143
16
2.0
16
93
6
55
19
19
0
61
1.35
38802--38836
16
2.3
15
90
5
52
65
14
0
20
1.26

Tables:   1

The End!