Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003384.1 Hibiscus syriacus cultivar Beakdansim tig00007121_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79164

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
110--155
24
1.9
24
82
8
58
30
0
50
19
1.48
5077--5165
33
2.7
33
84
5
126
41
16
12
29
1.85
5516--5544
13
2.1
14
93
6
51
48
0
0
51
1.00
11091--11125
16
2.1
17
94
5
63
34
25
8
31
1.86
25496--25563
31
2.2
31
86
5
93
50
13
8
27
1.71
37326--37376
14
3.4
14
75
15
57
54
27
11
5
1.59
50470--50508
19
2.1
19
85
4
53
56
0
12
30
1.37
50598--50634
10
3.8
10
89
3
58
29
0
0
70
0.88
51067--51099
16
2.1
16
100
0
66
39
6
18
36
1.75
53918--53968
5
10.2
5
100
0
102
19
41
39
0
1.52
55159--55244
40
2.2
40
100
0
172
41
18
6
32
1.77
61505--61594
32
2.8
32
100
0
180
20
38
6
34
1.78
63667--63735
30
2.4
28
83
9
77
37
14
10
37
1.80
63684--63753
30
2.3
30
87
0
104
31
12
17
38
1.87
70995--71045
23
2.2
23
100
0
102
29
11
19
39
1.87

Tables:   1

The End!