Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003385.1 Hibiscus syriacus cultivar Beakdansim tig00007124_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59906

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6832--6914
38
2.2
39
78
10
91
51
4
0
43
1.23
10593--10649
29
2.0
29
96
3
107
10
3
24
61
1.44
15303--15347
23
2.0
23
86
8
65
33
15
0
51
1.44
26019--26188
60
2.8
60
91
0
268
37
10
14
37
1.80
26447--26495
21
2.3
21
89
0
71
65
10
10
14
1.47
26925--27022
21
4.8
20
75
10
81
38
21
18
21
1.93
26989--27258
20
13.5
20
81
6
269
37
25
17
20
1.94
27940--27986
24
2.0
24
87
8
69
25
14
21
38
1.92
28161--28185
12
2.1
12
100
0
50
72
0
28
0
0.86
28872--28918
20
2.4
19
89
3
67
10
14
29
44
1.79
28966--29527
93
6.1
93
98
0
1090
46
19
12
22
1.83
31234--31290
14
3.7
14
70
20
51
43
22
22
10
1.84
31226--31340
33
3.5
33
95
0
203
47
19
21
11
1.80
31226--31345
19
7.1
18
67
24
75
46
19
22
11
1.82
31364--31441
41
1.9
41
97
0
147
12
25
16
44
1.83
31365--31440
21
3.7
21
83
3
109
11
25
17
46
1.82
31520--31590
33
2.2
33
92
0
115
47
18
22
11
1.80
31772--31826
22
2.5
22
81
0
74
20
16
40
23
1.91
31973--32126
20
7.7
20
81
7
168
18
18
26
37
1.93
31972--32126
40
3.8
40
82
4
186
18
18
26
37
1.93
32322--32362
16
2.6
16
88
3
57
39
14
19
26
1.90
35060--35452
41
9.6
42
76
10
302
32
18
18
30
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35090--35453
83
4.4
82
83
5
412
31
17
19
31
1.95
35090--35453
124
3.0
121
75
10
362
31
17
19
31
1.95
38264--38291
3
9.3
3
100
0
56
32
0
0
67
0.91
39509--39568
21
2.8
22
84
2
77
20
5
20
55
1.62
40157--40190
15
2.3
15
89
0
50
14
29
11
44
1.81
40236--40298
30
2.1
31
81
3
74
41
11
23
23
1.87

Tables:   1

The End!