Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000339.1 Hibiscus syriacus cultivar Beakdansim tig00000629_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74918

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10608--10632
13
1.9
13
100
0
50
24
60
0
16
1.36
13607--13879
139
2.0
131
88
5
393
29
8
15
46
1.75
15508--15547
21
1.9
21
84
0
53
17
32
32
17
1.93
16918--17200
142
2.0
137
91
3
449
30
8
15
46
1.75
23027--23184
65
2.5
63
84
6
192
30
23
17
28
1.97
28810--28906
30
3.2
30
83
2
115
34
26
19
19
1.96
28837--28931
31
3.1
31
83
1
102
37
22
17
22
1.94
29826--29863
20
1.9
20
100
0
76
23
23
21
31
1.98
29828--29883
20
2.6
20
86
11
67
26
23
17
32
1.97
29871--30011
64
2.2
64
81
8
155
26
22
17
33
1.96
33089--33183
31
3.1
31
84
4
104
35
24
18
21
1.95
34075--34132
20
2.6
22
89
10
84
25
22
20
31
1.98
34120--34260
64
2.2
63
80
9
153
25
22
18
33
1.97
34248--34298
21
2.4
21
100
0
102
31
19
19
29
1.97
38543--38743
65
3.1
64
80
11
223
30
22
18
27
1.98
66426--66467
20
2.0
21
90
4
68
40
9
14
35
1.78
73763--73819
30
1.9
30
96
0
105
54
8
17
19
1.68

Tables:   1

The End!