Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003398.1 Hibiscus syriacus cultivar Beakdansim tig00007147_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59737

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2607--2810
39
5.2
39
75
9
130
29
16
18
35
1.93
2607--2886
41
7.0
40
77
6
210
31
17
16
35
1.92
2625--2810
78
2.4
78
77
9
175
30
17
17
33
1.94
2758--2903
41
3.5
41
81
0
175
32
15
12
39
1.85
4688--4763
38
2.0
38
94
2
136
18
18
14
48
1.81
8555--8599
20
2.2
20
88
0
72
31
26
4
37
1.76
10914--10969
23
2.4
23
84
0
76
28
19
17
33
1.95
20908--20975
13
5.2
13
83
0
82
32
17
20
29
1.96
21395--21458
23
2.8
23
90
0
92
25
23
23
28
2.00
25546--25590
2
22.5
2
100
0
90
48
0
0
51
1.00
32526--32596
20
3.2
22
70
23
60
45
2
5
46
1.41
40026--40163
64
2.2
63
79
6
145
31
15
23
28
1.95
40154--40207
20
2.5
20
85
11
63
33
16
24
25
1.96
41871--41931
23
2.7
23
86
0
86
18
26
26
29
1.98
44183--44275
3
30.7
3
81
6
107
59
0
1
39
1.05
44516--44605
36
2.5
36
92
0
144
18
20
10
51
1.75
44551--45430
113
7.8
112
90
1
1219
29
18
15
36
1.91
46159--46712
83
6.7
83
95
0
966
37
23
12
26
1.90
47860--47902
13
3.5
13
81
9
54
0
16
0
83
0.64
47860--47900
16
2.7
15
85
10
57
0
17
0
82
0.66
47861--47905
20
2.3
20
85
11
58
0
17
0
82
0.68
47860--47906
9
5.0
9
78
19
51
0
17
0
82
0.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58389--58432
22
2.1
22
87
8
65
59
2
2
36
1.23

Tables:   1

The End!