Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000034.1 Hibiscus syriacus cultivar Beakdansim tig00000055_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26620

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4057--4116
27
2.4
25
86
13
95
31
13
16
38
1.87
4065--4123
27
2.2
27
100
0
118
28
13
15
42
1.85
10568--10598
15
2.1
15
93
0
53
54
0
0
45
0.99
13934--13987
27
2.0
28
85
3
74
24
31
5
38
1.78
14593--14834
72
3.4
72
93
2
405
49
4
10
34
1.59
15392--15456
2
32.5
2
100
0
130
49
0
0
50
1.00
16918--16942
12
2.1
12
100
0
50
40
8
12
40
1.72
19152--19447
160
1.9
161
95
2
544
31
9
7
52
1.60
19567--19612
20
2.4
20
85
7
60
32
2
0
65
1.05
20791--20852
13
4.5
13
79
15
70
46
4
17
30
1.69
20792--20848
30
1.9
30
96
0
105
45
5
17
31
1.71
21815--21880
27
2.4
27
92
0
114
30
12
18
39
1.87
22177--22247
32
2.3
32
95
4
128
42
5
2
49
1.41

Tables:   1

The End!