Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003400.1 Hibiscus syriacus cultivar Beakdansim tig00007155_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65920

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10343--10421
36
2.2
36
90
0
122
30
17
20
31
1.96
10554--10611
13
4.5
13
72
12
57
22
22
0
55
1.44
13790--13835
18
2.5
18
85
3
56
47
13
6
32
1.68
13802--13836
18
1.9
18
94
0
61
45
11
5
37
1.64
14022--14096
24
3.0
25
83
11
75
25
18
0
56
1.42
14093--14162
19
3.8
18
77
5
68
30
20
10
40
1.85
16932--17006
30
2.5
30
82
6
82
34
14
2
48
1.58
20077--20247
85
2.0
86
93
1
290
36
11
4
47
1.59
27171--27222
25
2.0
26
85
10
72
51
0
0
48
1.00
28276--28300
11
2.3
11
100
0
50
8
28
32
32
1.86
28873--28921
3
16.7
3
83
12
66
65
0
0
34
0.93
29226--29835
113
5.3
113
83
7
728
27
19
15
38
1.92
29226--29835
236
2.7
227
82
8
766
27
19
15
38
1.92
29833--30063
76
3.0
76
95
0
399
34
21
19
24
1.96
30067--30392
164
2.0
165
91
0
537
37
13
13
34
1.84
30900--30954
22
2.5
22
87
0
83
41
14
7
36
1.74
33514--33739
114
2.0
114
92
0
380
30
19
15
34
1.93
36026--36056
13
2.4
13
100
0
62
0
19
0
80
0.71
40778--40826
24
2.1
24
88
3
73
61
2
2
34
1.19
43010--43058
3
16.7
3
83
12
66
65
0
0
34
0.93
45821--45887
31
2.2
31
83
0
80
28
2
17
50
1.61
51836--51909
35
2.1
36
80
16
84
41
17
18
21
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52598--52669
23
3.1
23
85
0
99
16
26
23
33
1.96
52606--52684
23
3.4
23
82
3
97
16
25
26
31
1.96
52747--52806
25
2.4
25
81
13
61
21
23
1
53
1.55
53859--54036
90
2.0
90
93
0
302
36
12
6
44
1.69
58962--59083
29
4.0
30
73
16
99
30
17
7
45
1.75
58962--59083
30
4.0
29
73
13
84
30
17
7
45
1.75
61150--61179
13
2.3
13
94
0
51
63
0
0
36
0.95
62061--62106
23
2.0
23
83
4
58
54
0
8
36
1.32
62502--62532
2
16.0
2
93
6
55
51
0
0
48
1.00
62858--62896
2
19.5
2
100
0
78
51
0
48
0
1.00
63102--63130
8
3.6
8
100
0
58
13
0
37
48
1.43

Tables:   1

The End!