Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003411.1 Hibiscus syriacus cultivar Beakdansim tig00007187_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75043

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3277--3320
23
2.0
22
83
12
56
45
0
13
40
1.44
8878--8951
29
2.6
29
82
2
96
21
33
10
33
1.88
10364--10388
2
12.5
2
100
0
50
52
0
0
48
1.00
10386--10416
3
10.3
3
100
0
62
67
0
0
32
0.91
25913--25942
3
10.3
3
92
7
53
70
0
30
0
0.88
27416--27463
25
1.9
25
87
8
71
39
4
0
56
1.19
27416--27467
12
4.3
12
78
7
52
38
3
0
57
1.17
30235--30272
19
2.0
19
89
0
58
21
15
28
34
1.94
34803--34840
19
2.0
19
89
0
58
21
15
28
34
1.94
35447--35482
18
2.0
18
94
0
63
16
19
11
52
1.73
40328--40365
19
2.0
19
89
0
58
21
15
28
34
1.94
40977--41011
18
1.9
18
94
0
61
17
20
11
51
1.75
41598--41629
16
2.0
16
100
0
64
25
25
18
31
1.98
46682--46715
15
2.3
15
89
0
50
50
5
29
14
1.67
52646--52675
13
2.3
13
94
0
51
10
6
0
83
0.81
64493--65043
157
3.4
160
85
6
717
28
16
5
48
1.70
64461--65034
321
1.8
319
85
4
818
28
17
5
48
1.70
68380--68419
21
2.0
21
90
5
64
37
10
32
20
1.85

Tables:   1

The End!