Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003415.1 Hibiscus syriacus cultivar Beakdansim tig00007193_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63554

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3832--4075
51
4.9
51
83
6
297
45
16
13
23
1.83
3837--4075
101
2.4
99
84
6
304
45
16
14
23
1.84
7259--7343
42
2.0
42
97
0
161
31
22
18
27
1.97
11811--11912
50
2.0
50
94
0
177
32
11
12
43
1.79
27286--27352
34
1.9
34
82
14
84
47
19
11
20
1.81
28365--28409
23
2.0
23
86
0
63
26
28
24
20
1.99
28388--28691
149
2.0
149
99
0
599
34
20
17
27
1.95
29518--29552
18
1.9
18
88
11
54
22
17
5
54
1.64
30137--30181
21
2.1
21
84
8
56
15
22
28
33
1.95
38275--38371
4
25.0
4
68
14
51
20
8
3
68
1.30
38298--38322
10
2.5
10
100
0
50
12
8
0
80
0.92
48791--48818
1
28.0
1
100
0
56
100
0
0
0
0.00
49605--50170
105
5.4
105
95
0
997
33
24
18
24
1.97
52212--52236
10
2.5
10
100
0
50
12
8
0
80
0.92
62495--62520
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!