Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003419.1 Hibiscus syriacus cultivar Beakdansim tig00007197_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72424

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
427--505
21
3.8
21
77
3
70
24
13
18
43
1.87
527--568
20
2.1
20
86
0
57
21
11
26
40
1.88
4734--4792
21
2.8
21
78
0
64
30
20
15
33
1.93
4834--4895
20
3.0
20
81
4
70
22
9
27
40
1.85
8166--8550
54
7.3
54
87
4
538
35
21
17
26
1.95
10471--10505
18
1.9
18
94
0
61
8
22
14
54
1.67
13900--13962
24
2.6
24
90
5
92
20
15
25
38
1.92
16771--16861
23
4.0
23
85
0
128
29
24
17
28
1.97
17589--17646
22
2.6
22
97
0
107
25
22
12
39
1.89
20623--20683
14
4.4
14
84
13
74
63
1
0
34
1.04
20612--20662
18
3.1
16
82
17
61
70
0
0
29
0.87
20623--20676
19
2.8
19
84
13
67
66
1
0
31
1.02
20617--20679
28
2.2
27
84
15
83
65
1
0
33
1.03
20609--20661
14
4.0
13
84
15
65
69
0
0
30
0.88
20617--20670
28
2.0
28
89
10
85
68
0
0
31
0.90
20771--20892
62
2.0
60
85
6
165
39
8
4
47
1.55
20809--20855
23
2.0
25
83
8
62
42
6
4
46
1.48
20823--20990
87
2.0
85
83
9
216
39
10
4
45
1.59
20841--20957
50
2.3
50
82
4
128
36
11
5
45
1.66
25867--25897
15
2.1
15
93
0
53
45
0
0
54
0.99
31574--31621
21
2.3
21
79
17
55
58
2
2
37
1.22
32278--32318
5
8.2
5
97
0
55
21
65
0
12
1.25
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32402--32467
29
2.3
27
82
14
80
27
1
4
66
1.20
32412--32476
29
2.2
31
94
5
116
29
0
4
66
1.12
32430--32481
13
3.8
13
71
14
50
28
0
1
69
0.99
38760--38915
64
2.4
65
81
7
158
29
21
17
31
1.96
46617--46656
21
1.9
21
89
0
62
55
7
7
30
1.56
50472--50553
23
3.7
22
78
6
85
24
25
21
28
1.99
53205--53360
64
2.4
65
81
5
165
28
22
19
29
1.98
54074--54142
29
2.3
30
80
7
79
14
4
39
42
1.66
54218--54341
51
2.4
50
81
4
149
23
33
27
16
1.95
54311--54365
27
2.0
27
96
0
101
30
34
23
10
1.89
56159--56212
21
2.6
21
96
0
99
31
22
12
33
1.92
58914--58972
4
14.8
4
100
0
118
50
23
0
25
1.49
59406--59444
19
2.1
19
95
0
69
38
7
25
28
1.83
59479--59546
20
3.3
20
74
8
64
38
14
20
26
1.91
65423--65460
20
1.9
20
94
0
67
26
7
26
39
1.83
65428--65468
20
2.0
20
90
0
64
26
12
21
39
1.89
65780--65869
34
2.6
34
94
3
155
27
14
15
42
1.86
70573--70603
6
5.2
6
100
0
62
0
51
0
48
1.00

Tables:   1

The End!