Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003424.1 Hibiscus syriacus cultivar Beakdansim tig00007211_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  149099

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2599--2644
11
4.3
11
83
8
51
8
17
0
73
1.07
5715--5762
21
2.3
20
80
16
53
25
0
31
43
1.55
17206--17270
13
5.0
13
96
0
112
43
7
24
24
1.80
22340--22590
117
2.1
117
83
4
319
37
19
15
27
1.92
22676--22750
26
2.9
26
79
0
96
28
20
12
40
1.87
24020--24066
20
2.4
20
85
3
60
34
25
2
38
1.68
26567--26615
25
2.0
25
100
0
98
36
14
4
44
1.64
28093--28146
5
10.8
5
91
0
63
51
18
9
20
1.73
28093--28146
10
5.4
10
93
0
72
51
18
9
20
1.73
51899--51951
20
2.7
20
77
8
63
32
20
20
26
1.98
52706--52825
64
1.9
64
84
3
161
27
17
18
36
1.93
59472--59528
20
2.8
20
78
0
51
28
28
21
22
1.99
64653--64691
20
2.0
19
90
5
60
38
28
0
33
1.57
71752--71817
29
2.2
31
78
10
75
30
16
7
45
1.75
84850--84899
7
7.4
7
88
8
77
24
28
32
16
1.96
84856--84899
13
3.3
13
96
3
79
22
29
31
15
1.95
84850--84899
20
2.5
20
90
6
75
24
28
32
16
1.96
84908--84967
10
6.1
10
71
11
52
23
30
25
21
1.99
84922--84967
19
2.3
20
96
3
85
23
30
26
19
1.98
92133--92183
7
7.6
7
89
8
79
27
29
27
15
1.96
92140--92183
13
3.3
13
96
3
79
25
29
29
15
1.96
92133--92183
20
2.5
21
87
9
79
27
29
27
15
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
92152--92212
17
3.4
17
81
6
59
19
26
37
16
1.93
92206--92275
9
7.3
9
70
12
50
28
28
24
18
1.98
92206--92277
19
3.7
19
77
3
72
27
27
23
20
1.99
99455--99577
51
2.5
50
86
5
162
30
19
8
42
1.80
99615--101806
81
27.1
81
84
2
2646
31
23
10
34
1.89
99615--101806
403
5.4
403
84
2
2635
31
23
10
34
1.89
101913--102062
57
2.6
57
90
3
223
33
17
14
35
1.89
116209--116249
21
1.9
21
85
5
55
41
7
14
36
1.74
124012--124059
22
2.2
22
84
0
60
43
2
6
47
1.40
124230--124360
61
2.1
61
82
0
154
27
16
29
26
1.96
133853--133894
17
2.4
17
81
18
50
40
7
19
33
1.78
143829--143878
5
9.8
5
80
20
59
4
20
54
22
1.61

Tables:   1

The End!