Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003426.1 Hibiscus syriacus cultivar Beakdansim tig00007219_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40503

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
416--924
137
3.7
136
80
7
525
35
25
17
21
1.95
1151--1485
102
3.3
102
80
7
367
34
21
17
26
1.95
1663--1697
3
11.3
3
93
6
61
34
0
0
65
0.93
5139--5428
153
1.9
152
89
3
449
30
22
26
21
1.99
6193--6275
2
43.0
2
92
7
145
50
0
0
49
1.00
13223--13300
38
2.1
38
90
0
120
17
10
19
52
1.73
13282--13335
22
2.4
21
80
17
56
11
7
18
62
1.50
14228--14261
8
4.1
8
85
7
50
76
0
0
23
0.79
14747--14782
18
2.0
18
100
0
72
22
22
16
38
1.93
15032--15070
19
2.0
21
90
10
64
58
10
7
23
1.56
15703--15759
22
2.6
22
91
0
96
70
1
7
21
1.20
17548--17590
21
2.0
21
81
0
50
27
27
25
18
1.98
18567--18743
30
5.9
30
100
0
354
23
23
23
30
1.99
22063--22105
21
2.0
21
81
0
50
27
27
25
18
1.98
23079--23255
30
5.9
30
100
0
354
23
23
23
30
1.99
24162--24305
72
2.0
72
89
4
218
49
13
9
28
1.72
28678--28727
25
2.0
24
84
3
64
56
0
2
42
1.11
29632--29681
2
25.0
2
100
0
100
50
0
0
50
1.00

Tables:   1

The End!