Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003427.1 Hibiscus syriacus cultivar Beakdansim tig00007222_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52594

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1012--1041
5
6.2
5
92
7
53
0
16
0
83
0.65
1009--1046
9
4.2
9
83
9
51
0
18
0
81
0.69
1012--1038
14
1.9
14
100
0
54
0
14
0
85
0.61
1012--1046
13
2.6
13
90
4
52
0
17
0
82
0.66
1178--1225
24
2.0
24
87
4
69
20
20
25
33
1.97
7749--7783
16
2.1
17
89
5
54
2
17
0
80
0.84
14480--14532
9
5.8
9
80
12
63
1
3
9
84
0.81
14481--14520
17
2.4
17
91
0
62
0
5
10
85
0.75
14478--14532
19
3.1
16
79
20
65
1
3
9
85
0.79
14482--14533
28
1.9
26
92
7
86
1
3
11
82
0.88
15940--15980
22
1.9
21
90
5
64
26
2
36
34
1.70
18594--18633
19
2.0
21
85
14
57
15
12
12
60
1.60
18594--18636
22
2.0
22
86
9
61
13
13
11
60
1.59
19597--19653
14
3.9
14
79
18
62
5
12
1
80
0.95
23806--23872
14
4.8
13
77
13
71
1
11
2
83
0.82
24304--24343
21
1.9
21
85
10
55
62
0
12
25
1.30
24366--24406
22
1.9
21
90
5
64
26
2
36
34
1.70
24576--24733
77
2.1
77
100
0
316
41
10
15
32
1.80
27624--27692
33
2.1
33
83
5
86
30
36
1
31
1.67
37705--37773
33
2.1
33
83
5
86
30
36
1
31
1.67
38887--38929
22
2.0
22
86
9
61
13
11
11
62
1.54
39596--39638
23
1.9
21
81
13
50
34
13
18
32
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49136--49184
12
4.4
12
75
19
52
0
10
12
77
0.99

Tables:   1

The End!