Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003431.1 Hibiscus syriacus cultivar Beakdansim tig00007229_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57118

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
975--1019
15
3.0
15
83
0
54
48
2
0
48
1.13
4311--4382
16
4.4
16
69
20
51
33
1
2
62
1.18
4602--4642
20
2.0
21
90
4
66
51
2
7
39
1.43
5241--5287
16
2.9
16
90
3
67
36
0
2
61
1.08
14680--14734
20
2.8
20
85
0
83
36
21
18
23
1.95
15481--15752
43
6.3
43
71
7
131
26
16
22
34
1.95
15786--15905
44
2.7
43
82
7
143
26
20
22
30
1.99
20020--20178
52
3.1
52
96
0
300
42
16
8
32
1.77
22448--22603
31
5.0
31
89
6
228
19
17
23
39
1.93
22840--22974
18
7.5
18
71
9
105
42
3
22
31
1.71
22848--22982
36
3.8
36
84
9
170
42
2
21
33
1.68
39316--39384
30
2.3
30
89
0
102
23
8
31
36
1.85
40368--40406
18
2.2
18
86
9
53
38
2
2
56
1.27
44948--44996
18
2.6
19
80
3
55
55
2
2
40
1.23

Tables:   1

The End!