Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003433.1 Hibiscus syriacus cultivar Beakdansim tig00007237_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63569

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13222--13805
197
3.0
196
91
3
969
46
13
16
22
1.82
16005--16151
75
2.0
75
89
2
224
27
23
5
44
1.75
18031--18070
21
2.0
20
85
5
53
32
12
2
52
1.52
18047--18116
37
2.0
34
86
8
95
40
8
4
47
1.54
18205--18259
21
2.6
20
83
11
65
36
0
12
50
1.41
20936--21077
58
2.5
57
75
15
132
33
19
3
43
1.68
23152--23196
23
2.0
23
90
0
72
8
44
20
26
1.80
23192--23234
22
2.0
22
90
0
68
2
44
18
34
1.63
23192--23225
11
3.1
11
100
0
68
0
47
17
35
1.48
26460--26494
17
2.1
17
94
0
61
57
14
0
28
1.38
28438--28479
18
2.3
18
100
0
84
14
4
11
69
1.34
29946--29986
16
2.7
16
92
7
68
17
21
12
48
1.79
31729--31830
51
2.0
51
96
0
186
30
20
12
36
1.90
34042--34069
14
2.0
14
100
0
56
21
21
7
50
1.72
34945--35030
42
2.0
42
95
0
154
27
47
12
11
1.76
36731--36784
24
2.2
24
96
0
99
24
27
20
27
1.99
40106--40144
17
2.3
17
100
0
78
33
12
0
53
1.39
41322--41366
20
2.2
20
92
0
72
26
24
11
37
1.89
42149--42177
14
2.1
14
100
0
58
31
13
20
34
1.92
60578--60635
16
3.6
16
95
0
98
56
20
12
10
1.64
60896--60955
12
5.2
12
78
8
70
21
20
20
38
1.94
60913--60955
11
3.8
11
81
6
59
23
23
20
32
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60900--60955
23
2.4
23
100
0
112
23
21
21
33
1.97

Tables:   1

The End!