Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003434.1 Hibiscus syriacus cultivar Beakdansim tig00007238_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54811

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
136--205
35
2.0
34
86
8
97
55
5
20
18
1.62
8448--8827
37
9.9
37
80
11
367
43
6
2
46
1.44
8453--8548
26
3.8
25
65
21
67
48
7
1
42
1.37
8453--8752
77
3.9
73
77
13
229
45
6
2
46
1.41
8454--8791
76
4.4
73
75
16
292
44
6
2
46
1.44
8549--8827
39
7.3
37
80
10
251
42
6
3
47
1.46
24953--24994
21
2.0
21
86
9
59
21
19
23
35
1.96
25198--25258
32
2.0
29
87
9
86
45
13
6
34
1.69
27821--27850
15
1.9
16
93
6
53
53
3
0
43
1.17
40016--40054
21
1.9
20
94
5
69
23
30
15
30
1.95
41348--41388
12
3.5
12
78
15
50
65
0
26
7
1.18
46899--46951
23
2.3
23
74
6
54
20
28
3
47
1.68

Tables:   1

The End!