Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003435.1 Hibiscus syriacus cultivar Beakdansim tig00007239_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56422

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10767--10809
20
2.2
20
87
4
61
34
9
6
48
1.62
12663--12705
19
2.2
20
91
4
70
37
9
6
46
1.63
17280--17324
10
4.6
10
80
5
56
0
4
11
84
0.76
18074--18113
18
2.2
20
82
13
50
62
7
2
27
1.35
24033--24112
11
6.7
11
71
23
56
31
35
3
30
1.75
24033--24112
35
2.2
37
86
4
110
31
35
3
30
1.75
29586--29654
33
2.1
33
83
5
86
30
36
1
31
1.67
39306--39383
35
2.2
37
90
4
124
29
37
5
28
1.79
39832--39873
15
2.9
15
79
13
52
78
2
16
2
0.96
47139--47202
26
2.5
25
80
14
69
9
17
3
70
1.27
47155--47211
17
3.5
15
79
13
60
3
17
5
73
1.16
49274--49322
19
2.6
19
86
0
62
36
10
6
46
1.63
49660--49739
35
2.2
37
91
4
128
31
37
3
27
1.74
53685--53764
35
2.2
37
91
4
128
31
37
3
27
1.74
54175--54279
49
2.3
46
84
12
128
33
1
13
51
1.52
54907--54936
15
2.0
15
100
0
60
6
20
13
60
1.55

Tables:   1

The End!