Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003442.1 Hibiscus syriacus cultivar Beakdansim tig00007259_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43612

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1641--1679
16
2.4
17
95
4
71
48
12
0
38
1.42
7713--7752
21
1.9
21
89
0
62
32
10
2
55
1.47
14258--14308
18
2.8
18
87
0
66
17
19
33
29
1.95
15263--15310
3
16.0
3
95
0
60
66
25
0
8
1.19
15719--15779
29
2.1
29
93
0
104
32
4
34
27
1.78
15806--16082
134
2.1
134
98
0
536
32
22
15
29
1.95
16684--16752
34
2.0
34
97
0
129
33
18
17
30
1.94
23633--23668
19
1.9
18
88
5
54
36
2
2
58
1.27
24840--24885
2
23.0
2
100
0
92
50
0
0
50
1.00
40444--40499
28
2.0
28
86
6
78
14
37
21
26
1.92
40503--40569
15
4.5
15
81
3
73
29
22
20
26
1.99
40562--40657
14
6.9
14
90
0
129
23
36
19
19
1.95
40501--40657
42
3.7
43
82
3
183
25
31
19
22
1.98
40656--40694
14
2.8
14
88
0
60
15
10
23
51
1.73

Tables:   1

The End!