Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003443.1 Hibiscus syriacus cultivar Beakdansim tig00007260_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55135

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3379--3446
35
1.9
36
90
3
111
32
36
2
27
1.72
7769--7821
22
2.3
23
87
3
72
35
35
1
26
1.68
9488--9513
13
2.0
13
100
0
52
30
0
46
23
1.53
9841--9883
20
2.2
19
84
12
52
51
6
11
30
1.65
14502--14557
22
2.5
22
82
2
58
37
39
0
23
1.55
14896--14937
22
1.9
22
90
0
66
78
2
14
4
1.01
24406--24449
21
2.0
21
87
12
63
15
22
0
61
1.34
24653--24682
14
2.1
14
93
0
51
43
13
13
30
1.82
27607--27657
20
2.6
20
90
3
77
39
11
5
43
1.66
28493--28539
11
4.2
11
81
5
58
76
2
19
2
0.99
29791--29856
24
2.8
24
80
0
69
36
16
15
31
1.90
33102--33144
21
2.0
22
82
13
54
32
6
41
18
1.77
33505--33550
20
2.3
20
85
3
58
39
15
6
39
1.73
33909--33949
17
2.4
17
100
0
82
21
36
4
36
1.75
34330--34354
13
1.9
13
100
0
50
80
0
20
0
0.72
34409--34433
11
2.3
11
100
0
50
84
0
16
0
0.63
36619--36657
20
2.0
20
90
5
62
30
12
10
46
1.75
37626--37676
19
2.6
20
90
3
77
33
17
5
43
1.73
38030--38070
17
2.4
17
91
0
64
24
36
4
34
1.77
38043--38089
24
2.0
24
83
8
60
23
34
4
38
1.74
46953--47006
24
2.2
25
80
6
58
29
22
14
33
1.94

Tables:   1

The End!