Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003445.1 Hibiscus syriacus cultivar Beakdansim tig00007267_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55113

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2581--2729
59
2.5
59
84
2
174
34
24
12
28
1.92
12367--12526
85
1.9
85
87
7
236
28
3
13
55
1.54
17911--17967
6
9.5
6
100
0
114
15
15
15
52
1.75
19733--19771
6
6.3
6
85
5
51
17
10
15
56
1.66
19733--19775
19
2.4
18
92
7
70
18
9
16
55
1.67
24011--24122
42
2.7
42
78
2
109
24
22
22
31
1.99
24656--24767
42
2.7
42
83
2
136
24
24
21
30
1.99
23902--25213
214
6.1
215
92
1
2056
32
15
20
32
1.93
23963--25213
431
2.9
429
92
1
2047
31
15
20
32
1.93
25087--25209
42
3.0
42
84
3
142
23
23
24
28
2.00
37662--37694
17
1.9
17
93
0
57
54
15
6
24
1.63
37976--38009
17
2.0
17
88
0
50
23
0
2
73
0.97
49008--49067
22
2.7
22
81
0
75
56
6
13
23
1.60
49008--49074
22
3.0
22
76
4
73
58
7
11
22
1.58
49445--49546
32
3.2
32
77
10
93
36
16
15
31
1.91
52208--52297
46
2.0
46
84
4
119
45
22
15
16
1.85
52305--52381
32
2.4
31
82
6
91
41
36
9
12
1.75

Tables:   1

The End!