Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003447.1 Hibiscus syriacus cultivar Beakdansim tig00007282_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  97796

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10587--10668
41
2.0
41
100
0
164
31
31
12
24
1.92
13258--13292
18
1.9
18
94
0
61
20
14
54
11
1.70
13545--13616
3
24.0
3
97
0
126
66
2
0
30
1.06
13739--14407
119
5.6
118
89
2
862
24
19
14
40
1.89
13845--14498
237
2.7
235
87
3
864
24
19
15
40
1.90
13739--14777
119
8.7
117
84
5
851
25
18
15
40
1.90
14384--14785
123
3.3
122
85
3
531
26
16
16
40
1.89
17095--17144
24
2.1
24
85
7
66
60
14
2
24
1.45
31841--31907
23
2.9
23
71
6
64
34
22
20
22
1.97
38165--38199
17
1.9
18
88
11
54
48
11
2
37
1.54
38381--38423
18
2.4
18
84
7
52
51
11
2
34
1.51
42102--42159
29
2.0
29
96
0
107
17
12
22
48
1.80
45700--45725
2
13.0
2
100
0
52
50
0
0
50
1.00
48259--48403
60
2.4
60
84
2
184
33
22
4
38
1.76
48568--48728
60
2.7
60
78
6
166
45
6
18
30
1.73
49010--49051
2
21.0
2
100
0
84
50
0
0
50
1.00
49800--49850
27
2.0
26
88
7
77
66
0
3
29
1.09
56228--56252
13
1.9
13
100
0
50
56
8
12
24
1.62
56497--56614
2
60.0
2
86
6
170
50
0
0
47
1.12
57566--57693
65
2.0
64
98
1
247
19
20
28
31
1.97
62968--63100
59
2.3
59
95
0
239
33
21
11
34
1.89
71708--71789
36
2.3
36
100
0
164
39
4
6
50
1.49
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73386--73469
43
2.0
43
92
0
141
36
8
14
40
1.76
74016--74077
27
2.5
24
81
7
70
48
1
0
50
1.10
74042--74137
33
2.8
31
74
22
84
52
3
1
43
1.24
79390--79457
3
22.7
3
100
0
136
33
0
0
66
0.92
82309--82391
34
2.4
34
95
0
148
24
15
8
51
1.71
90498--90642
32
4.5
32
76
1
112
30
17
15
36
1.91
97366--97421
20
2.6
21
81
16
71
57
5
1
35
1.32
97366--97421
22
2.7
20
84
13
69
57
5
1
35
1.32
97433--97514
31
2.6
31
81
9
87
54
4
1
39
1.29

Tables:   1

The End!