Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003449.1 Hibiscus syriacus cultivar Beakdansim tig00007285_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51328

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1405--1452
22
2.2
22
100
0
96
33
25
14
27
1.94
18174--18248
37
2.1
36
89
2
114
53
14
8
24
1.68
18579--18604
7
3.7
7
100
0
52
0
88
0
11
0.52
20942--20974
16
2.1
16
100
0
66
57
24
12
6
1.57
21045--21105
16
3.8
16
93
0
104
57
22
11
8
1.60
22278--22328
14
3.9
14
75
19
56
56
21
11
9
1.63
22288--22338
10
4.7
10
80
17
57
54
25
11
7
1.63
22278--22339
24
2.6
24
94
0
106
54
22
12
9
1.67
22298--22339
14
3.3
14
75
25
56
52
26
14
7
1.67
22282--22362
34
2.4
34
78
12
85
50
22
14
12
1.76
24176--24265
38
2.4
38
78
16
89
51
2
2
44
1.26
24181--24255
38
2.0
37
82
10
91
48
2
2
46
1.30
35290--36265
84
11.7
83
78
5
912
25
19
24
31
1.98
35290--36265
249
3.9
249
87
2
1334
25
19
24
31
1.98
41524--41577
20
2.8
19
86
10
74
77
0
3
18
0.91
41524--41577
11
5.6
10
76
20
53
77
0
3
18
0.91
44683--44707
2
12.5
2
100
0
50
52
0
0
48
1.00
44806--44841
9
4.1
9
92
7
65
11
0
0
88
0.50
44806--44841
17
2.1
18
94
5
65
11
0
0
88
0.50
46509--46539
15
2.0
15
93
6
53
41
6
6
45
1.55
46471--46585
38
3.1
38
78
16
132
43
3
8
44
1.52
49024--49112
20
4.5
20
73
8
83
42
23
12
21
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49824--49857
12
2.8
12
90
0
50
55
29
0
14
1.40

Tables:   1

The End!