Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003451.1 Hibiscus syriacus cultivar Beakdansim tig00007292_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68478

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
467--492
12
2.2
12
100
0
52
26
0
0
73
0.84
11363--11528
36
4.6
36
81
5
158
43
3
9
44
1.51
11581--11631
14
3.6
14
84
5
59
27
0
0
72
0.85
14555--14656
39
2.6
37
86
11
134
40
11
8
39
1.73
14555--14656
38
2.6
39
85
14
140
40
11
8
39
1.73
19825--19948
59
2.1
59
86
3
169
29
23
16
29
1.97
21678--21751
31
2.4
31
86
0
94
36
18
9
35
1.84
42490--42527
3
12.7
3
94
0
67
2
0
63
34
1.09
42484--42533
9
5.6
9
90
0
55
10
0
56
34
1.33
43342--43374
16
1.9
18
88
11
52
27
6
12
54
1.60
45895--45937
20
2.2
20
100
0
86
41
9
16
32
1.80
46619--46662
18
2.5
18
85
3
54
31
0
2
65
1.05
46629--46721
49
2.0
48
82
6
118
37
0
4
58
1.18
46620--46723
24
4.3
24
73
9
77
36
0
3
59
1.16
47185--47242
25
2.3
24
80
11
62
32
15
5
46
1.68
47888--47921
3
11.0
3
87
6
50
67
0
2
29
1.05
48035--48066
2
16.0
2
100
0
64
50
0
0
50
1.00
48987--49021
2
17.5
2
100
0
70
48
0
0
51
1.00
57339--57373
18
1.9
18
88
0
52
51
22
8
17
1.72
57663--57717
23
2.5
22
77
14
58
9
16
7
67
1.40
57933--57979
24
2.0
23
84
16
60
57
2
21
19
1.51
65681--65716
17
2.1
17
94
0
63
33
22
13
30
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66043--66908
433
2.0
431
83
2
1083
36
13
18
30
1.90

Tables:   1

The End!