Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000346.1 Hibiscus syriacus cultivar Beakdansim tig00000637_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80656

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55--93
19
2.0
20
85
5
53
41
0
2
56
1.13
759--795
16
2.2
17
90
4
58
45
2
0
51
1.15
1166--1278
47
2.3
49
89
9
176
23
3
15
57
1.53
1849--1948
30
3.4
30
95
1
175
19
42
23
16
1.89
4738--4786
20
2.5
20
86
0
71
34
20
16
28
1.94
5658--5697
21
1.9
21
89
0
62
27
17
17
37
1.92
6880--6950
35
2.0
36
94
2
126
16
30
30
21
1.95
11728--11766
20
2.0
20
84
0
51
23
7
23
46
1.78
11922--11961
21
1.9
21
89
0
62
10
25
40
25
1.86
11944--12004
20
2.9
21
87
7
79
18
26
34
21
1.96
22999--23070
35
2.0
37
94
5
130
16
31
31
19
1.94
53700--53999
161
1.8
163
92
4
516
13
17
22
47
1.82
55309--55357
17
2.9
16
75
19
55
71
2
0
26
0.97
55296--55354
18
3.4
18
71
21
54
69
1
0
28
0.98
55317--55397
26
3.1
25
75
16
67
66
6
1
25
1.22
55333--55432
45
2.3
44
81
5
114
66
5
1
28
1.19
64991--65020
3
10.0
3
92
0
51
66
0
30
3
1.07

Tables:   1

The End!