Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003477.1 Hibiscus syriacus cultivar Beakdansim tig00007350_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  95861

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6278--6310
16
2.0
17
88
5
50
57
12
0
30
1.35
7062--7117
28
2.0
28
96
3
105
30
25
17
26
1.97
15686--15768
42
2.0
42
95
0
148
43
25
6
25
1.77
16636--16703
31
2.2
31
89
0
100
41
10
7
41
1.67
22469--22505
19
1.9
19
88
0
56
37
0
5
56
1.22
23115--23159
23
2.0
23
95
0
81
22
8
15
53
1.69
31075--31214
36
4.0
34
82
9
156
32
22
25
19
1.97
31566--31648
29
2.8
29
94
1
148
40
13
14
31
1.84
33989--34340
176
2.0
176
96
2
654
29
21
14
34
1.93
35137--35202
34
1.9
35
96
3
125
12
31
15
40
1.83
36516--36598
29
2.8
29
94
1
148
40
13
14
31
1.84
37527--37558
14
2.1
16
88
11
50
56
3
0
40
1.15
45403--45445
18
2.4
19
84
7
54
18
6
4
69
1.29
49439--49485
20
2.3
20
85
3
58
61
12
14
10
1.56
54214--54243
15
2.0
15
100
0
60
46
20
13
20
1.83
65183--65220
19
2.0
19
85
10
51
31
0
15
52
1.43
68732--68796
3
23.0
3
84
12
93
67
0
1
30
1.00
68732--68796
11
5.8
11
89
3
87
67
0
1
30
1.00
68996--69375
87
4.3
87
90
3
517
25
19
28
26
1.98
69056--69280
41
5.2
41
71
14
175
25
19
29
25
1.98
83748--83804
3
20.0
3
83
16
77
68
0
0
31
0.90
83748--83804
11
5.3
11
83
12
82
68
0
0
31
0.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83749--83804
26
2.2
25
87
3
85
69
0
0
30
0.89
86854--86898
21
2.1
21
87
0
63
33
11
11
44
1.75
93258--93285
2
14.0
2
100
0
56
50
0
0
50
1.00
94494--94536
20
2.2
20
100
0
86
32
37
13
16
1.88
95041--95224
93
2.0
92
89
7
284
38
8
15
38
1.77
95131--95298
74
2.4
71
82
9
177
36
8
14
40
1.76
95088--95497
161
2.5
167
88
7
610
37
8
14
39
1.76
95427--95804
155
2.5
150
80
9
420
36
7
15
40
1.76
95577--95650
26
2.9
26
87
2
105
31
12
18
37
1.88
95635--95747
38
3.0
39
67
17
94
30
7
15
46
1.73

Tables:   1

The End!