Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003487.1 Hibiscus syriacus cultivar Beakdansim tig00007371_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42769

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1521--1559
3
13.0
3
100
0
78
33
0
0
66
0.92
6797--6858
31
1.9
33
87
6
92
45
0
19
35
1.51
6793--6866
32
2.3
34
76
9
91
52
0
16
31
1.44
13328--13422
21
4.6
21
72
15
90
20
20
26
33
1.96
13352--13436
42
2.0
42
97
0
161
21
20
23
35
1.96
13334--13413
19
4.0
19
75
12
79
21
18
26
33
1.96
13368--13437
21
3.2
23
76
15
94
20
22
20
37
1.95
14134--14376
21
12.0
21
71
11
148
36
23
18
21
1.95
14183--14367
40
4.6
40
92
2
291
36
24
17
21
1.94
14385--14435
21
2.4
21
86
0
66
21
19
25
33
1.97
16650--16687
20
1.9
20
100
0
76
36
10
28
23
1.88
16712--16835
62
2.0
62
87
0
176
30
4
24
41
1.73
19984--20018
17
2.1
17
88
0
52
31
5
11
51
1.61
26012--26084
28
2.6
28
93
0
119
36
6
4
52
1.48
38627--38658
15
2.1
16
94
5
57
43
12
6
37
1.68
38731--38798
16
4.1
17
72
10
52
69
1
1
27
1.06
41206--41271
27
2.4
29
90
7
102
57
9
10
22
1.60
41218--41280
27
2.5
24
82
15
65
49
7
11
31
1.67

Tables:   1

The End!