Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003494.1 Hibiscus syriacus cultivar Beakdansim tig00007390_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53917

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3990--4019
7
4.3
7
91
0
51
46
36
0
16
1.47
3990--4043
21
2.6
21
81
0
72
46
31
0
22
1.52
5007--5078
35
2.1
34
92
2
117
18
38
12
30
1.87
7689--7721
17
1.9
17
100
0
66
27
18
24
30
1.98
20119--20218
54
1.9
51
84
10
130
50
14
6
30
1.66
21349--21931
248
2.4
247
85
1
774
30
21
16
32
1.95
28106--28163
30
2.0
27
83
9
71
43
1
1
53
1.21
28106--28165
28
2.2
26
82
14
68
43
1
1
53
1.20
33370--33408
16
2.4
16
78
0
51
23
17
33
25
1.96
33386--33483
32
3.1
32
74
11
101
21
11
28
38
1.88
33716--33772
30
1.9
30
96
0
105
33
3
8
54
1.48
34147--34194
19
2.7
18
77
6
53
47
4
0
47
1.21
43512--43584
28
2.6
28
85
8
96
38
6
2
52
1.43
43501--43555
2
28.5
2
81
7
60
43
3
1
50
1.30

Tables:   1

The End!