Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000035.1 Hibiscus syriacus cultivar Beakdansim tig00000056_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  91659

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9725--9795
34
2.2
32
87
5
97
22
29
15
32
1.95
10074--10115
21
2.0
21
95
0
75
26
28
21
23
1.99
10227--10288
15
4.0
15
77
8
70
24
25
29
20
1.99
10227--10288
32
1.9
32
90
0
97
24
25
29
20
1.99
10274--10314
21
2.0
21
90
9
66
17
29
36
17
1.92
13262--13331
34
2.1
32
86
5
95
22
30
15
31
1.95
13611--13651
21
2.0
21
95
0
73
26
29
17
26
1.97
13763--13841
33
2.3
35
86
6
117
22
22
32
21
1.98
13813--13872
20
3.0
20
80
4
68
18
28
31
21
1.97
14647--14685
20
2.0
20
89
0
60
12
25
38
23
1.90
25379--25496
60
2.0
60
89
0
182
15
41
9
33
1.79
43491--43662
84
2.0
84
96
0
317
41
5
12
40
1.66
54399--54446
24
2.0
25
84
12
64
33
4
0
62
1.14
56829--56925
51
1.9
51
86
0
140
21
0
32
45
1.52
61496--61525
15
2.0
15
93
0
51
46
0
50
3
1.18
69979--70134
78
2.0
78
98
0
303
30
10
26
31
1.91
81583--81757
90
2.0
89
91
1
287
44
6
11
37
1.67
86419--86453
16
2.2
16
100
0
70
5
34
14
45
1.68

Tables:   1

The End!