Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003506.1 Hibiscus syriacus cultivar Beakdansim tig00007413_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74365

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6937--7146
5
41.6
5
88
10
313
59
0
0
40
1.05
21114--21142
2
14.5
2
100
0
58
48
0
0
51
1.00
23332--23396
31
2.1
31
88
5
96
30
9
21
38
1.85
31692--31840
3
49.7
3
90
0
235
64
0
0
34
0.99
32131--32807
113
6.0
113
98
0
1275
29
18
12
39
1.88
33366--33740
133
2.8
134
97
0
700
36
20
13
28
1.91
34475--34519
18
2.6
17
89
6
65
55
6
6
31
1.52
34852--34915
12
5.1
12
80
17
76
3
17
0
79
0.85
34848--34937
17
5.2
16
72
18
56
5
15
0
78
0.92
34848--34915
19
3.7
18
75
19
68
2
17
0
79
0.86
45534--45570
15
2.7
15
88
12
53
62
8
5
24
1.44
47656--47784
3
43.7
3
89
3
199
64
0
0
34
0.99
52153--52208
3
18.7
3
100
0
112
66
0
0
33
0.92
58135--58180
18
2.6
18
100
0
92
54
0
4
41
1.20
58277--58332
27
2.1
26
80
9
60
50
1
5
42
1.35
65198--65267
31
2.3
31
78
9
72
50
5
4
40
1.46
65260--65345
30
2.8
30
79
8
102
52
1
3
43
1.26
65377--65415
18
2.1
19
90
4
62
35
0
12
51
1.40
66899--66941
21
2.0
22
86
4
61
25
2
0
72
0.97
68968--68992
13
1.9
13
100
0
50
44
0
0
56
0.99
72138--72246
55
2.0
55
100
0
218
36
11
8
44
1.70
72950--73059
47
2.3
46
83
9
134
24
21
29
24
1.99

Tables:   1

The End!