Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003508.1 Hibiscus syriacus cultivar Beakdansim tig00007415_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51289

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
95--128
15
2.3
15
90
10
52
20
0
8
70
1.13
454--487
18
1.9
18
88
5
52
44
5
2
47
1.42
1049--1366
158
2.0
160
95
4
583
46
5
8
40
1.55
7180--7213
17
1.9
17
88
5
50
35
11
8
44
1.72
14306--14330
12
2.1
12
100
0
50
60
8
8
24
1.52
16995--17027
12
2.8
12
95
0
57
15
12
42
30
1.83
21602--21664
22
2.7
22
76
16
56
50
11
9
28
1.69
29802--29841
2
20.0
2
100
0
80
50
0
0
50
1.00
39947--39987
16
2.7
16
81
7
50
70
2
24
2
1.11
47832--48075
120
2.0
120
99
0
479
24
25
15
35
1.94
48957--49020
19
3.6
18
74
21
71
4
14
29
51
1.62

Tables:   1

The End!