Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003509.1 Hibiscus syriacus cultivar Beakdansim tig00007416_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59063

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4236--4288
25
2.1
25
100
0
106
43
18
3
33
1.68
8543--8577
16
2.2
16
90
10
54
25
0
14
60
1.35
12206--12256
16
3.0
17
74
5
50
60
0
1
37
1.08
12476--12524
24
2.0
24
84
8
62
36
12
8
42
1.72
13897--13922
12
2.2
12
100
0
52
23
7
0
69
1.14
22849--22880
13
2.5
13
100
0
64
28
25
21
25
1.99
39757--39820
21
3.0
21
68
8
58
68
3
4
23
1.23
39892--40554
323
2.0
327
90
4
1038
45
7
4
42
1.54
42480--42528
18
2.7
18
78
6
55
63
4
4
28
1.31
44555--44625
37
1.9
37
91
0
115
40
11
11
36
1.77
45319--45355
3
12.3
3
88
0
56
29
0
2
67
1.04
45285--45355
6
11.8
6
79
11
58
25
5
1
67
1.20
45285--45355
9
7.9
9
74
14
58
25
5
1
67
1.20
45510--45560
17
3.0
16
82
8
57
19
9
0
70
1.14
48368--48418
23
2.2
23
78
0
57
78
5
13
1
1.02
48368--48449
33
2.4
34
78
10
87
73
7
17
2
1.17
49878--50378
109
4.6
110
89
4
779
34
22
16
25
1.95
51473--51579
37
2.9
37
97
1
198
40
13
10
36
1.78
51950--52007
19
3.1
18
75
9
53
24
0
3
72
1.00
52113--52264
3
48.0
3
68
20
53
30
4
1
63
1.23
52181--52268
7
13.1
7
71
20
64
29
4
0
65
1.12
57478--57570
33
2.8
33
83
0
114
36
10
9
43
1.73

Tables:   1

The End!