Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003510.1 Hibiscus syriacus cultivar Beakdansim tig00007418_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63668

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5796--5845
24
2.1
24
85
3
66
44
0
4
52
1.20
6549--6606
27
2.1
27
96
0
107
67
10
3
18
1.35
6559--6606
15
3.4
15
75
16
57
66
8
4
20
1.35
6982--7083
31
3.3
31
90
0
159
21
10
12
54
1.68
7748--7790
22
2.0
22
86
9
61
30
11
25
32
1.91
8057--8100
21
2.1
21
87
4
63
29
20
13
36
1.91
8967--9007
19
2.2
19
86
0
55
41
9
17
31
1.82
9038--9091
19
2.8
19
81
10
65
44
12
12
29
1.80
13312--13357
19
2.3
21
75
14
53
17
17
6
58
1.59
16894--16992
50
2.0
50
97
0
189
18
7
19
55
1.65
30088--30122
2
17.5
2
93
0
61
51
0
48
0
1.00
33209--33323
38
3.0
38
85
0
167
44
6
2
46
1.44
40193--40234
22
2.0
21
85
4
57
14
11
4
69
1.34
44256--44302
18
2.6
18
86
3
67
23
17
12
46
1.82
51666--51693
2
14.0
2
100
0
56
50
0
0
50
1.00
52686--52756
19
3.7
19
96
3
133
22
21
35
21
1.96
56478--56528
26
2.0
25
92
3
84
47
11
25
15
1.80

Tables:   1

The End!