Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003513.1 Hibiscus syriacus cultivar Beakdansim tig00007425_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61946

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5769--5871
18
6.5
15
66
24
50
0
44
0
53
1.13
5768--5819
7
7.0
7
80
10
59
0
42
1
55
1.10
5808--5916
18
6.2
18
73
18
86
1
44
0
54
1.11
5772--5957
33
5.6
33
77
13
152
1
42
1
55
1.14
5868--5937
15
4.5
14
75
19
59
1
37
0
61
1.05
7066--7113
18
2.7
18
77
9
53
43
0
2
54
1.12
7164--7204
22
1.9
21
85
5
55
63
0
7
29
1.21
9695--9728
16
2.1
17
88
5
52
50
11
0
38
1.39
15561--15592
14
2.3
14
94
0
55
37
0
0
62
0.95
16667--16741
7
10.7
7
69
25
52
44
0
1
54
1.08
16667--16825
63
2.5
63
91
4
259
42
0
2
54
1.13
16699--16853
83
1.8
83
81
10
190
43
0
1
54
1.16
16820--16881
19
3.3
19
78
15
58
37
1
0
61
1.06
17495--17554
31
1.9
31
93
0
102
43
10
6
40
1.64
20408--20935
142
3.7
142
99
0
1029
24
16
25
33
1.96
20408--20935
285
1.9
284
98
0
1029
24
16
25
33
1.96
23038--23188
74
2.0
75
90
1
241
35
12
10
41
1.78
27078--27106
14
2.0
15
93
6
51
44
20
0
34
1.52

Tables:   1

The End!