Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003523.1 Hibiscus syriacus cultivar Beakdansim tig00007444_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70657

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18138--18180
16
2.7
16
81
0
59
16
27
27
27
1.97
18484--18530
24
2.0
24
91
0
76
53
0
0
46
1.00
18860--18961
20
5.2
20
81
7
111
27
25
20
26
1.99
19784--19837
24
2.2
24
90
0
81
22
16
20
40
1.91
22099--22133
18
1.9
18
88
0
52
51
25
5
17
1.67
22304--22523
20
11.6
20
75
11
178
34
21
18
25
1.96
22312--22453
74
1.9
74
89
0
221
35
21
16
25
1.95
22311--22523
94
2.3
94
85
2
277
34
22
18
24
1.96
22513--22570
20
2.9
21
82
10
77
12
17
27
43
1.84
22674--22728
29
1.9
28
85
3
74
47
18
0
34
1.49
22669--22730
14
4.3
14
79
6
70
46
16
0
37
1.47
24136--24235
21
4.8
21
69
4
67
24
18
35
23
1.96
24144--24236
42
2.2
42
80
3
107
23
16
38
21
1.92
24722--24767
20
2.4
19
85
7
58
39
28
15
17
1.90
26652--26747
20
4.8
20
80
2
95
46
21
16
14
1.83
27133--27189
21
2.7
21
83
5
62
22
14
42
21
1.88
27359--27494
20
6.8
20
78
6
105
30
20
21
27
1.98
28257--28298
13
3.1
13
80
19
50
40
2
2
54
1.26
28469--28518
20
2.5
20
100
0
100
38
0
0
62
0.96
29576--29612
6
6.0
6
96
3
65
0
64
0
35
0.94
35513--35621
42
2.6
42
94
2
186
23
11
19
45
1.82
36514--36574
23
2.7
23
84
0
77
37
26
19
16
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39938--39968
12
2.6
12
89
0
53
22
25
0
51
1.48
41572--41641
23
3.0
23
85
0
95
30
25
24
20
1.99
42095--42121
12
2.2
12
100
0
54
40
18
0
40
1.51
44335--44386
24
2.2
24
100
0
104
42
3
15
38
1.65
50052--50100
24
2.0
25
84
4
64
36
6
24
32
1.80
52640--52666
14
1.9
14
100
0
54
22
3
29
44
1.70
52788--53346
160
3.5
159
84
7
680
28
17
5
49
1.68
54758--54806
24
2.0
24
81
14
57
28
14
20
36
1.92
54958--54991
16
2.1
17
88
5
52
41
8
0
50
1.34
55028--55063
17
2.1
17
94
0
63
52
11
2
33
1.51
57358--57737
46
8.3
46
90
0
580
23
22
8
44
1.80
57526--57613
12
7.3
12
67
27
53
23
20
10
45
1.82
66241--66283
20
2.2
20
86
0
59
34
20
9
34
1.85
66350--66546
46
4.3
46
88
2
297
22
23
8
45
1.80
66350--66474
20
5.7
20
66
23
72
21
25
9
43
1.83
66462--66618
72
2.2
73
89
4
239
22
22
8
46
1.78
66416--66650
118
2.0
118
88
3
348
23
22
8
45
1.80
66538--66651
46
2.5
46
92
0
183
22
21
10
44
1.83
69076--69133
28
2.0
29
83
9
75
25
5
20
48
1.70

Tables:   1

The End!