Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003529.1 Hibiscus syriacus cultivar Beakdansim tig00007451_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57037

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
926--950
12
2.1
12
100
0
50
40
24
0
36
1.55
1302--1341
18
2.3
17
84
16
55
35
0
5
60
1.19
2115--2150
2
18.5
2
94
5
65
52
0
0
47
1.00
3365--3434
35
2.0
36
88
8
108
31
17
21
30
1.96
3627--3665
19
2.0
20
85
14
55
53
17
10
17
1.71
4163--4212
18
2.8
18
84
6
57
36
20
28
16
1.93
24244--24519
46
6.0
45
90
2
435
45
9
22
22
1.81
36063--36180
46
2.6
46
91
0
191
44
10
22
22
1.83
36063--36201
26
5.8
26
68
19
106
46
10
21
22
1.81
36096--36252
72
2.2
73
87
6
232
45
10
22
22
1.82
36168--36318
46
3.3
47
85
5
193
45
9
22
21
1.81
36096--36299
26
8.6
25
68
22
109
46
10
21
22
1.81
36064--36298
118
2.0
118
87
3
339
45
9
21
22
1.81
36240--36318
20
3.7
20
70
18
68
45
8
22
22
1.80
36385--36427
20
2.2
20
91
0
68
32
11
20
34
1.89
43825--43870
17
2.7
17
93
0
83
43
0
21
34
1.53
44899--45279
46
8.3
46
92
0
627
44
9
22
23
1.82
44912--45267
20
15.7
20
68
22
154
43
9
23
23
1.82
47533--47568
17
2.1
17
100
0
72
33
5
11
50
1.61
49211--49767
157
3.5
157
82
7
666
48
5
17
28
1.68
49889--49915
14
1.9
14
100
0
54
44
29
3
22
1.70
52391--52450
25
2.3
26
72
13
61
33
20
5
41
1.74

Tables:   1

The End!