Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003535.1 Hibiscus syriacus cultivar Beakdansim tig00007461_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61046

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11069--11114
18
2.6
18
89
0
65
39
8
23
28
1.84
11267--11340
36
2.0
37
82
7
89
51
4
1
43
1.29
12366--12393
14
2.0
14
100
0
56
50
7
0
42
1.30
17418--17456
14
2.5
16
80
20
55
56
0
2
41
1.13
18140--18252
60
1.9
60
85
7
158
51
3
10
34
1.54
26517--26551
18
1.9
18
88
0
52
42
2
0
54
1.15
26733--26777
23
2.0
23
86
0
63
53
2
2
42
1.25
26746--26915
91
1.9
89
80
9
195
50
4
0
44
1.22
26880--26956
27
3.0
26
76
18
81
48
0
2
49
1.15
26880--26954
23
2.9
26
77
18
77
49
0
2
48
1.15
27069--27111
14
3.0
14
89
3
59
37
18
11
32
1.87
32832--32916
23
3.8
21
80
12
89
52
9
16
21
1.71
38252--38291
20
2.0
21
85
5
55
37
12
12
37
1.81
38536--38568
13
2.5
14
85
14
52
60
0
3
36
1.12
41421--41541
20
5.9
20
76
7
118
14
21
21
42
1.89
41399--41513
61
1.9
61
94
0
203
17
20
22
40
1.92
41505--41619
22
5.4
22
75
8
121
20
17
23
39
1.92
41399--41535
61
2.2
61
88
5
177
17
19
22
40
1.92
41485--41637
41
3.7
41
88
6
227
18
18
22
39
1.92
42739--42802
21
3.1
20
73
8
58
39
23
21
15
1.92
42745--42802
20
2.8
21
74
7
57
39
24
22
13
1.90
49239--49284
24
2.0
23
82
4
56
45
2
0
52
1.13

Tables:   1

The End!