Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003538.1 Hibiscus syriacus cultivar Beakdansim tig00007465_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49516

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4806--4833
14
2.0
14
100
0
56
50
7
0
42
1.30
5574--5616
20
2.3
18
80
11
50
51
6
0
41
1.29
17401--17493
37
2.5
37
89
0
141
53
5
4
36
1.43
17430--17493
22
3.2
21
67
28
59
57
4
4
32
1.40
18481--18519
16
2.4
16
91
0
60
25
33
0
41
1.56
21251--21302
20
2.6
20
100
0
104
26
19
19
34
1.95
35905--35969
27
2.4
28
92
5
107
53
3
9
33
1.48
36841--36899
29
2.0
29
100
0
118
23
13
13
49
1.78
41514--41572
29
2.1
28
96
3
109
23
13
11
50
1.74
47901--47959
23
2.7
21
84
7
73
23
32
27
16
1.96
47912--47961
23
2.2
23
92
3
84
20
38
24
18
1.93
49467--49511
17
2.8
16
86
3
54
53
22
22
2
1.57
49472--49511
16
2.4
17
87
4
55
55
22
22
0
1.44

Tables:   1

The End!