Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000355.1 Hibiscus syriacus cultivar Beakdansim tig00000651_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82865

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16768--16804
13
2.8
13
100
0
74
48
5
32
13
1.65
19712--20184
236
2.0
236
94
0
829
34
19
7
38
1.79
22209--22267
30
1.9
30
82
3
73
32
20
5
42
1.74
22489--22566
27
2.9
27
98
0
147
43
1
7
47
1.40
22489--22566
19
4.3
18
70
18
54
43
1
7
47
1.40
28951--29094
61
2.4
60
83
6
200
37
17
14
30
1.90
34050--34096
23
2.0
23
100
0
94
21
21
17
40
1.91
35089--35139
22
2.3
22
100
0
102
43
23
0
33
1.54
35140--35196
29
2.0
29
89
0
87
17
12
12
57
1.64
38065--38089
13
1.9
13
100
0
50
16
32
0
52
1.44
38087--38178
45
2.1
44
87
2
130
27
19
7
45
1.77
41331--41358
2
14.0
2
100
0
56
50
0
0
50
1.00
47913--48232
83
3.9
83
85
3
411
42
10
5
41
1.63
52699--52812
56
2.0
56
96
0
210
21
15
26
35
1.94
56106--56150
21
2.1
21
84
8
56
31
20
20
28
1.97
68194--68301
46
2.2
46
84
11
128
26
25
21
26
1.99
72313--72351
18
2.2
18
90
0
60
23
20
28
28
1.99
74095--74133
20
2.0
20
89
0
60
46
0
23
30
1.53
74472--74658
60
3.1
61
79
7
177
31
19
5
43
1.74
74810--74918
29
3.8
29
67
13
80
38
5
22
33
1.77
74798--74911
58
2.0
58
85
1
158
41
5
21
32
1.75

Tables:   1

The End!