Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003553.1 Hibiscus syriacus cultivar Beakdansim tig00007498_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85636

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
456--503
2
24.0
2
100
0
96
50
0
0
50
1.00
7242--7275
14
2.4
14
85
5
50
29
0
38
32
1.58
13212--13240
11
2.5
12
88
11
51
41
0
0
58
0.98
14475--14522
2
24.0
2
100
0
96
50
0
0
50
1.00
14650--14711
32
1.9
32
100
0
124
40
20
12
25
1.89
16087--16135
2
24.5
2
100
0
98
48
0
0
51
1.00
30043--30108
23
2.6
25
77
20
66
50
3
0
46
1.16
30111--30199
34
2.8
33
75
18
89
48
1
1
49
1.16
30211--30290
27
3.1
24
72
21
63
47
1
2
48
1.23
30292--30372
34
2.5
33
80
11
96
45
6
0
48
1.27
30569--30602
14
2.4
14
95
0
59
41
14
5
38
1.70
40802--40859
29
2.0
28
83
3
71
46
3
15
34
1.63
41111--41153
2
21.5
2
100
0
86
48
0
0
51
1.00
46850--46975
42
3.0
42
84
0
144
39
21
18
20
1.92
47692--47873
45
4.2
46
84
13
240
29
18
33
18
1.95
47692--47872
84
2.1
86
87
8
260
29
18
33
18
1.95
50167--50203
18
2.1
18
89
0
56
29
10
35
24
1.89
51476--51520
23
2.0
23
95
0
81
31
20
2
46
1.62
51748--51788
19
2.3
18
84
16
50
31
0
12
56
1.36
52148--52174
2
13.5
2
100
0
54
48
0
0
51
1.00
58593--58655
24
2.6
25
80
5
76
3
28
6
61
1.36
60672--60706
17
2.1
17
100
0
70
42
17
11
28
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66846--66870
8
3.1
8
100
0
50
48
52
0
0
1.00
73625--73649
13
1.9
13
100
0
50
20
16
48
16
1.82

Tables:   1

The End!