Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003556.1 Hibiscus syriacus cultivar Beakdansim tig00007505_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64836

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
383--409
5
5.4
5
100
0
54
22
55
22
0
1.44
4799--4849
21
2.4
22
74
9
52
25
7
15
50
1.71
7966--8011
22
2.1
22
84
8
58
52
0
0
47
1.00
8074--8114
22
1.9
22
85
5
57
70
2
0
26
0.99
8072--8127
28
2.0
28
86
3
78
67
3
0
28
1.07
9714--9749
17
2.1
17
94
0
63
30
22
25
22
1.99
13787--13825
19
2.1
19
85
0
51
61
0
2
35
1.10
14484--14554
31
2.3
32
82
7
92
46
5
2
45
1.41
14498--14546
21
2.5
20
80
16
57
42
4
2
51
1.32
14499--14585
31
2.8
31
82
5
95
45
5
3
44
1.44
14535--14615
31
2.6
31
82
3
92
46
7
6
39
1.57
15915--15961
22
2.1
22
100
0
94
31
46
0
21
1.51
19604--19653
19
2.6
19
93
0
82
30
22
20
28
1.98
19686--19839
21
7.4
21
80
8
172
33
22
19
24
1.97
19686--19858
83
2.1
82
82
10
201
33
21
19
24
1.97
19854--19922
21
3.3
21
93
0
111
23
20
26
30
1.98
19854--19947
42
2.2
41
83
7
118
23
20
23
32
1.97
20758--20804
21
2.2
21
92
0
76
23
21
27
27
1.99
28189--28237
17
2.8
17
96
3
89
53
12
4
30
1.57
28744--29045
117
2.6
115
78
5
311
38
14
19
27
1.91
29181--29312
37
3.8
36
78
16
150
29
15
9
45
1.78
29183--29330
70
2.1
67
80
9
147
31
15
10
42
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30489--30580
42
2.3
41
82
14
113
47
5
18
28
1.70
39553--39595
20
2.2
20
86
0
59
27
18
27
25
1.98
48613--48649
18
2.1
18
89
0
56
13
8
54
24
1.66
48907--48948
18
2.3
18
95
4
75
16
7
4
71
1.26
54560--54768
42
5.0
42
91
1
339
26
17
12
42
1.86
54560--54768
83
2.5
83
96
0
373
26
17
12
42
1.86
57190--57235
20
2.3
19
89
10
74
54
10
17
17
1.70
57358--57404
20
2.4
19
82
10
67
53
10
17
19
1.72
57367--57409
20
2.3
19
88
11
63
51
11
16
20
1.75
59718--59781
31
2.0
33
87
6
96
28
0
48
23
1.51
61568--61623
18
3.1
18
84
2
67
33
1
10
53
1.46
61729--62880
197
5.9
199
95
3
2110
36
15
16
31
1.90
64343--64395
3
17.7
3
88
0
79
37
1
32
28
1.68

Tables:   1

The End!