Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003563.1 Hibiscus syriacus cultivar Beakdansim tig00007521_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55590

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--147
7
20.1
7
70
17
80
76
2
2
18
1.00
7--247
6
38.0
6
68
23
70
73
1
3
21
1.08
6--63
15
3.9
15
77
16
59
79
3
0
17
0.87
6--87
25
3.2
24
77
19
87
79
2
1
17
0.91
9--244
11
20.3
11
68
22
80
72
1
3
21
1.09
20--98
36
2.2
35
82
10
97
78
2
3
15
1.00
2035--2354
85
3.8
84
85
2
385
25
17
20
35
1.95
2483--2725
64
3.8
65
86
3
327
26
14
21
37
1.92
2698--2930
124
1.9
125
91
6
393
27
14
22
35
1.93
4588--4671
17
4.8
16
73
16
60
3
13
2
80
0.93
4599--4671
6
11.8
6
75
16
53
2
12
2
82
0.89
4599--4663
12
5.6
11
75
15
60
3
10
3
83
0.88
4600--4659
25
2.3
26
82
5
68
3
11
3
81
0.93
4587--4670
42
2.0
42
81
9
100
3
14
2
79
0.96
4641--4671
8
3.9
8
95
0
53
0
12
0
87
0.55
4625--4676
27
1.9
27
84
7
70
0
13
3
82
0.80
4613--4671
10
5.5
10
80
15
57
1
13
1
83
0.81
7617--7646
13
2.3
13
94
0
51
70
0
0
30
0.88
7736--7822
4
22.8
4
72
19
53
75
3
4
16
1.10
7862--7995
12
9.8
12
71
23
56
72
0
4
22
1.07
7880--7934
23
2.4
23
85
11
69
69
0
5
25
1.10
7883--7986
53
1.9
55
81
13
126
69
0
4
25
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8036--8062
4
6.8
4
100
0
54
77
0
0
22
0.76
11054--11125
37
1.9
37
97
0
135
31
19
18
30
1.95
13900--13955
29
1.9
29
92
0
94
39
8
3
48
1.52
17795--17828
13
2.5
13
90
9
50
61
0
29
8
1.26
21217--21479
128
2.0
128
98
0
508
29
12
20
37
1.89
28630--28654
12
2.1
12
100
0
50
28
0
8
64
1.22
28949--29001
27
2.0
27
81
7
63
45
0
9
45
1.36
30954--30998
21
2.1
21
83
0
54
31
31
24
13
1.93
31332--31379
24
2.0
24
84
8
62
37
6
16
39
1.74
31890--31967
31
2.5
31
78
12
79
23
19
23
34
1.96
31940--32218
30
9.3
30
97
0
506
22
22
23
30
1.99
32491--32546
2
28.0
2
92
0
94
46
1
1
50
1.22
35345--35389
21
2.1
21
83
0
54
31
31
24
13
1.93
36283--36360
31
2.5
31
78
12
79
23
19
23
34
1.96
36333--36641
30
10.3
30
97
0
566
22
22
23
30
1.99
36914--36955
2
21.0
2
90
0
66
45
2
2
50
1.27
38304--38375
22
3.5
20
75
18
69
31
16
23
27
1.96
38920--39194
47
5.9
47
88
1
392
43
10
22
23
1.84
38893--39195
27
12.5
26
68
23
173
43
9
22
24
1.83
38921--39185
141
1.9
141
94
0
467
43
10
22
23
1.84
39088--39167
20
3.7
20
74
20
79
41
8
27
22
1.83
45175--45235
28
2.2
28
96
0
113
26
16
4
52
1.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50665--50718
22
2.6
20
81
16
65
31
16
24
27
1.96
51203--51508
47
6.5
47
88
2
447
44
9
21
25
1.81
51204--51463
20
11.0
25
66
25
102
43
9
21
25
1.82

Tables:   1

The End!