Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003565.1 Hibiscus syriacus cultivar Beakdansim tig00007527_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73628

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
621--665
23
2.0
23
90
0
72
24
17
22
35
1.95
832--866
12
3.0
12
95
4
63
74
0
25
0
0.82
3115--3221
32
3.4
32
80
12
132
41
20
23
14
1.90
3328--3364
14
2.6
14
91
0
65
45
24
0
29
1.53
4694--4753
21
3.0
20
73
9
59
21
20
35
23
1.96
4733--4891
41
3.9
42
72
7
148
23
16
36
22
1.94
4724--4894
80
2.1
81
91
5
274
24
16
36
22
1.94
5121--5293
92
1.9
86
88
6
256
46
17
12
23
1.83
6970--7120
19
8.1
19
80
10
141
44
18
22
14
1.86
6995--7098
52
2.0
53
84
1
138
42
21
23
13
1.88
7116--7163
20
2.5
19
77
12
53
10
16
27
45
1.80
7717--7770
20
2.7
20
97
0
99
25
18
24
31
1.97
9386--9417
2
17.0
2
87
12
50
53
0
0
46
1.00
9381--9417
13
2.8
13
95
4
65
54
0
0
45
1.00
9383--9416
11
3.3
11
88
12
54
55
0
0
44
0.99
24841--24903
31
2.1
31
82
8
76
39
7
7
44
1.63
25002--25071
29
2.4
30
79
11
74
45
5
4
44
1.47
25978--26042
24
2.7
24
83
4
78
55
0
41
3
1.15
25956--26052
39
2.5
38
80
9
90
54
0
42
3
1.16
27972--27998
2
13.5
2
100
0
54
48
0
0
51
1.00
33206--33448
125
1.9
127
88
1
373
37
14
11
36
1.82
33598--33635
17
2.2
18
85
4
51
44
2
0
52
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34249--34317
30
2.2
30
85
15
95
34
5
17
42
1.73
34258--34317
30
2.0
30
93
6
104
33
6
16
43
1.74
34496--34591
20
4.7
21
88
5
142
19
33
17
29
1.95
34503--34591
41
2.2
41
95
0
160
20
34
15
29
1.93
34956--35025
34
2.1
32
86
5
95
31
15
30
22
1.95
36513--36551
18
2.2
18
85
0
51
43
5
0
51
1.24
40113--40166
14
3.9
14
90
0
81
12
11
14
61
1.58
40583--40633
16
3.3
16
86
5
70
11
9
15
62
1.53
45478--45517
2
20.0
2
100
0
80
50
0
0
50
1.00
45609--45658
2
25.0
2
100
0
100
50
0
0
50
1.00
59386--59416
5
6.2
5
100
0
62
22
19
19
38
1.93
60130--60193
30
2.1
30
88
0
92
31
14
14
40
1.85
60484--60517
16
2.2
16
89
5
52
55
0
2
41
1.15
65840--65902
2
31.5
2
100
0
126
50
0
0
49
1.00
66047--66122
38
2.0
38
92
0
125
35
11
14
38
1.83
72211--72248
19
2.0
19
94
0
67
18
31
18
31
1.95

Tables:   1

The End!