Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003568.1 Hibiscus syriacus cultivar Beakdansim tig00007534_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65013

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
833--957
28
4.5
28
78
9
121
47
2
10
40
1.51
833--949
55
2.1
57
82
4
139
47
2
10
40
1.51
849--957
57
1.9
55
81
7
130
50
1
9
38
1.45
947--993
18
2.6
18
82
3
58
42
0
10
46
1.38
3030--3105
30
2.5
30
89
0
116
18
35
25
21
1.95
3935--4103
60
2.8
58
81
6
169
28
21
15
33
1.95
6650--6728
12
6.6
12
69
5
52
21
27
11
39
1.88
6665--6696
15
2.1
15
94
0
55
21
28
9
40
1.84
6673--6728
24
2.3
24
84
6
78
25
26
8
39
1.85
7678--7708
16
2.0
16
93
6
55
74
0
0
25
0.82
17722--17751
4
7.8
4
92
7
53
0
26
0
73
0.84
25816--25874
23
2.5
23
83
2
73
23
15
16
44
1.86
30390--30446
29
1.9
30
82
3
71
56
5
3
35
1.39
31155--31196
15
2.9
14
89
7
57
0
21
2
76
0.90
31155--31199
20
2.2
20
88
7
65
0
22
2
75
0.91
31164--31200
11
3.5
11
85
14
51
0
18
5
75
0.99
31745--31804
3
20.0
3
92
0
102
66
0
1
31
1.01
32132--32814
116
6.0
116
90
2
915
30
18
14
36
1.90
33218--33272
22
2.5
22
90
0
92
38
14
12
34
1.84
35699--36156
115
4.0
115
95
0
783
33
20
13
31
1.92
35699--36156
229
2.0
230
93
0
783
33
20
13
31
1.92
38223--38252
11
2.7
11
89
0
51
0
13
0
86
0.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38218--38257
18
2.2
18
86
8
55
0
17
2
80
0.83
38554--38579
2
13.0
2
100
0
52
50
0
0
50
1.00
41671--41708
19
2.1
19
95
5
69
71
5
7
15
1.28
43229--43272
19
2.3
19
80
7
54
63
0
4
31
1.14
43223--43280
28
2.1
28
83
0
71
63
0
5
31
1.16
44069--44125
29
1.9
30
82
3
71
56
5
3
35
1.39
44819--44860
15
2.9
14
89
7
57
0
21
2
76
0.90
44819--44863
20
2.2
20
88
7
65
0
22
2
75
0.91
44828--44864
11
3.5
11
85
14
51
0
18
5
75
0.99
45361--45404
21
2.1
21
83
8
54
34
0
2
63
1.07
45403--45477
3
24.7
3
94
2
132
64
0
2
33
1.08
54206--54243
12
3.2
12
88
3
60
10
7
5
76
1.15
54254--54298
14
3.0
15
78
21
58
24
6
0
68
1.13
54251--54299
5
10.0
5
82
4
55
22
6
0
71
1.08
54599--54669
32
2.2
32
94
0
124
33
29
5
30
1.81
55654--55684
8
3.9
8
91
0
53
22
3
0
74
0.96
56442--56481
17
2.4
17
100
0
80
22
20
40
17
1.92
58500--58586
21
4.0
21
75
12
70
73
0
22
3
0.98
58486--58541
26
2.0
27
83
10
69
75
0
21
3
0.96
58536--58582
3
16.3
3
86
8
71
70
0
27
2
0.99
59181--59220
14
2.9
14
84
0
53
65
0
10
25
1.24
59906--60108
75
2.8
74
85
6
263
56
12
0
30
1.41
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60055--60102
25
2.0
24
83
4
60
60
14
0
25
1.34

Tables:   1

The End!