Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003572.1 Hibiscus syriacus cultivar Beakdansim tig00007541_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62458

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1278--1351
23
3.5
21
83
5
87
27
21
16
35
1.94
3559--3592
12
2.7
13
86
9
52
41
11
5
41
1.66
3699--3735
19
2.1
18
90
10
58
40
8
5
45
1.56
7558--7612
20
2.8
20
88
0
83
25
20
21
32
1.97
9857--10592
258
2.8
258
85
3
964
34
15
16
33
1.90
10737--10806
5
12.5
6
89
6
62
25
1
0
72
0.92
10765--10814
5
9.8
5
91
4
82
18
2
0
80
0.82
21441--21498
20
2.6
22
86
10
75
31
18
22
27
1.97
22477--22517
20
2.0
20
85
0
55
53
7
7
31
1.56
25868--25897
12
2.6
12
94
5
53
23
10
40
26
1.86
25893--25950
20
2.6
22
86
10
75
31
18
22
27
1.97
26777--26816
8
4.8
8
82
11
53
52
0
0
47
1.00
26775--26813
9
4.4
9
83
6
53
48
0
0
51
1.00
26775--26813
18
2.2
18
90
4
62
48
0
0
51
1.00
36329--36375
18
2.6
18
86
3
67
44
14
2
38
1.58
36581--36690
56
2.0
55
82
5
132
37
6
0
56
1.25
36616--36665
25
2.0
25
84
7
66
36
6
0
58
1.23
36617--36693
30
2.8
26
77
14
75
35
3
0
61
1.15
36620--36799
31
5.9
30
78
9
168
37
4
1
56
1.27
36618--36800
61
3.0
60
79
9
201
37
4
1
56
1.26
36620--36797
92
1.9
92
82
4
225
37
4
1
56
1.27
42689--42869
60
3.0
60
90
1
274
28
27
6
38
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42789--42869
31
2.7
30
74
14
78
29
30
2
37
1.71
52408--52481
20
3.7
20
75
12
62
31
29
10
28
1.91
52426--52532
20
5.2
20
70
11
65
30
25
11
32
1.91
52576--52641
20
3.3
20
76
4
71
31
24
12
31
1.92
52536--52641
39
2.7
39
79
1
104
32
25
11
31
1.91
56948--56995
21
2.2
21
77
3
51
33
29
27
10
1.90
58571--58881
102
3.1
103
93
2
533
26
13
23
36
1.92
58897--58948
23
2.3
23
93
0
86
19
30
26
23
1.98
58909--58964
23
2.4
23
84
0
67
25
28
19
26
1.99

Tables:   1

The End!