Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003579.1 Hibiscus syriacus cultivar Beakdansim tig00007554_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34852

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3357--3406
21
2.4
21
100
0
100
16
28
28
28
1.97
3423--3458
15
2.4
15
100
0
72
47
13
22
16
1.82
8924--8961
16
2.2
18
86
9
53
28
0
2
68
1.03
10379--10412
16
2.1
16
88
0
50
23
20
8
47
1.78
11318--11357
20
2.0
21
90
5
64
40
10
0
50
1.36
11631--11678
19
2.5
19
89
0
69
41
18
2
37
1.63
12557--12628
8
9.0
8
77
10
67
38
27
1
31
1.65
12557--12628
24
3.0
24
83
4
92
38
27
1
31
1.65
21107--21157
24
2.2
23
82
10
59
13
1
27
56
1.48
22062--22101
14
2.9
14
88
0
62
7
10
22
60
1.54
22074--22120
24
2.0
24
86
0
67
12
10
19
57
1.64
23180--23246
16
4.3
16
81
3
75
11
10
20
56
1.64
25192--25252
29
2.1
29
96
0
113
36
19
16
27
1.93
26799--26835
2
18.5
2
100
0
74
48
0
0
51
1.00
26982--27033
16
3.4
15
73
10
52
42
30
0
26
1.56
26955--27045
30
3.0
30
82
10
98
47
29
0
23
1.52

Tables:   1

The End!