Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003584.1 Hibiscus syriacus cultivar Beakdansim tig00007560_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66831

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3143--3180
16
2.4
16
90
0
58
31
21
15
31
1.94
5797--5830
2
17.0
2
100
0
68
50
0
0
50
1.00
6947--6990
21
2.1
21
87
8
63
9
31
0
59
1.29
9539--9630
45
2.0
46
91
2
150
30
27
17
25
1.97
17105--17148
21
2.1
21
82
0
52
9
38
15
36
1.80
17479--17507
14
2.0
15
93
6
51
6
3
27
62
1.37
18237--18274
19
2.1
19
85
9
53
28
28
18
23
1.98
18252--18317
26
2.5
26
90
0
105
27
22
16
33
1.96
23390--23483
12
7.8
12
68
13
59
17
14
17
51
1.77
23394--23485
24
3.8
24
86
0
121
17
14
16
52
1.75
25571--25621
18
2.8
18
87
0
75
21
43
19
15
1.88
28617--28656
20
1.9
22
85
10
57
35
7
7
50
1.59
29280--29332
20
2.7
19
75
11
54
64
1
0
33
1.05
31881--31961
35
2.3
35
86
2
108
39
22
2
35
1.67
34808--34843
12
3.0
12
87
0
54
22
0
47
30
1.52
42456--42530
35
2.1
35
82
4
89
34
1
18
45
1.58
47453--47480
3
9.3
3
100
0
56
67
0
0
32
0.91
61836--61916
26
3.2
25
67
22
69
34
16
7
41
1.76
61850--61930
25
3.2
24
68
22
67
33
14
8
43
1.76
61826--61967
51
2.8
51
89
1
203
35
13
7
43
1.71
66058--66153
48
2.0
48
91
4
158
35
14
6
43
1.71
66058--66194
51
2.8
49
84
4
134
35
13
6
44
1.69

Tables:   1

The End!